Functions
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VWRfirstrun()
- VertexWiseR system requirements installation
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HIPvextract()
- HIPvextract
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SURFvextract()
- SURFvextract
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FSLRvextract()
- FSLRvextract
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CAT12vextract()
- CAT12vextract
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smooth_surf()
- Smooth surface
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fs_stats()
- fs_stats()
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RFT_vertex_analysis()
- Vertex-wise analysis with random field theory cluster correction
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TFCE_vertex_analysis()
- Vertex-wise analysis with threshold-free cluster enhancement (fixed effect)
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TFCE_vertex_analysis_mixed()
- Vertex-wise analysis with threshold-free cluster enhancement (mixed effect)
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TFCE_threshold()
- Thresholding TFCE output
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plot_surf()
- Surface plotter
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plot_surf3d()
- 3D Surface plotter
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atlas_to_surf()
- Atlas to surface
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surf_to_atlas()
- Surface to atlas
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decode_surf_data()
- Decode surface data
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fs5_to_fs6()
- fsaverage5 to fsaverage6
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fs6_to_fs5()
- fsaverage6 to fsaverage5
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surf_to_vol()
- Surface to volume
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MNIsurface-class
- MNI surface map object
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edgelist-class
- Edge list object
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ROImap-class
- Region-of-Interest mapping object
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edgelist_hip
- List of edges for the hippocampal template
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fs6_to_fs5_map
- fsaverage6 template object for nearest neighbor conversion in fs6_to_fs5()
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hip_points_cells
- points and cells data required to build the hippocampus surface template
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MNImap_hip
- Hippocampal surface in MNI space
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ROImap_fs5
- Atlas parcellations of fsaverage5
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ROImap_fs6
- Atlas parcellations of fsaverage6
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ROImap_fslr32k
- Atlas parcellations of FS_LR32k
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ROImap_hip
- Atlas parcellations of the hippocampus (CITI168)